If you're not running Windows 8.1+ then:
Like suggested above, try Cura and see if that fits your needs. It's got a slick interface, but if I'm correct, Cura swaps the y axis with the z axis. I still don't know why it has to do that.
If you're looking to automate the conversion process from 3mf to stl, then download the code that I provided (see a couple of posts above here for the link to the code). Try cp13.zip; that's the latest version of the code. The code relies on the libzip library, which you will have to install onto your computer. Do you have a Mac?
Last edited: Nov 21, 2016